华西口腔医学杂志

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牙周可疑致病菌代谢组学鉴定的初步研究

鲁维希1 吴亚菲1 肖丽英1 李明云1 郭强1 熊萍1 贾向明2 肖晓蓉1 朱硃1 龚其美1 李伟1   

  1. 1.口腔疾病研究国家重点实验室, 四川大学; 2.四川大学分析测试中心, 四川成都610041
  • 收稿日期:2009-06-25 修回日期:2009-06-25 出版日期:2009-06-20 发布日期:2009-06-20
  • 通讯作者: 肖丽英,Tel:028-61153332
  • 作者简介:鲁维希(1983-),女,贵州人,硕士
  • 基金资助:

    教育部科学技术研究重大资助项目(307022);四川省应用基础研究资助项目(07JY029-072)

Preliminary study on the discrimination of putative periodontal pathogens with a metabonomics method

LU Wei-xi1, WU Ya-fei1, XIAO Li-ying1, LI Ming-yun1, GUO Qiang1, XIONG Ping1, JIA Xiang-ming2, XIAO Xiaorong1, ZHU Zhu1, GONG Qi-mei1, LI Wei1   

  1. 1. State Key Laboratory of Oral Diseases, Sichuan University, Chengdu 610041, China; 2. Analytical and Testing Center, Sichuan University, Chengdu 610041, China
  • Received:2009-06-25 Revised:2009-06-25 Online:2009-06-20 Published:2009-06-20
  • Contact: XIAO Li-ying,Tel:028-61153332

摘要:

目的分析比较牙周可疑致病菌的核磁共振代谢图谱,探讨用代谢组学方法快速鉴定口腔细菌的可能性。方法分别在BHI液体培养基中接种相同密度的牙龈卟啉单胞菌、中间普氏菌和具核梭杆菌,采用比浊法绘制生长曲线。取3种细菌生长稳定期的培养液进行核磁共振氢谱(1H-NMR)测定,用主成分分析法进行数据分析。结果主成分分析显示3组数据各自有较为集中的类聚关系,可以区分这3种细菌。结论代谢组学是一种具有良好应用前景的口腔细菌分类鉴定方法。

关键词: 代谢组学, 核磁共振, 细菌, 鉴定

Abstract:

Objective To evaluate the feasibility of identifying oral pathogenic bacteria by comparing the metabolic profiling of putative periodontal pathogens and try to find a convenient and rapid way to discriminate oral microorganisms. Methods Suspensions of Porphyromonas gingivalis, Prevotella intermedia and Fusobacterium nucleatum with same density were prepared and cultured respectively at liquid BHI medium. Then the growth quantity was measured periodically through turbidimetry and the growth curves of the inoculated bacteria were completed. The culture solutions of stable growth phase were sampled and characterized by 1H-nuclear magnetic resonance(1H-NMR). The data of 1HNMR spectroscope results were analyzed by principal components analysis(PCA). Results The PCA showed the obvious clustering phenomena and the points of three groups differentially centralized to three clusters. Therefore, the NMRbased metabonomics profiles could discriminate the three different kinds of bacteria. Conclusion The metabonomics is a potential classable method to identify the oral pathogenic bacteria.

Key words: metabonomics, nuclear magnetic resonance, bacterium, identification